Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933631.1_cds_XP_016479825.1_71328
CDS Infomation

[gene=LOC107801072] [db_xref=GeneID:107801072] [protein=uncharacterized protein LOC107801072] [protein_id=XP_016479825.1] [location=join(5243..6528,9803..9810,13033..13208,15487..15547,16479..16577,18181..18275,18582..18695,19764..19831,20750..20860,21063..21294,21479..21589)] [gbkey=CDS]
Sequence

ATGAGCACTACTCCTAATAAAAGACCACATGAGGATGGTGGAAATGTTAGTGGTAGTAAC
CGCAGTCACTCTTCTTCTCCAACGTACTACCAGGATGACTCTGGTAGAATGATCAAGCTG
ACGAGTGATGGAAAACTGGAATTTATTCGCTCCGTTGATGTAGGCCCAGATGGTCGAATG
CCGAAGATTCGACGGTTCGTATCACGGGATTCGGATAGAAGATCTCCTGAGCTACCAATG
TACCGTGTTTCATCATGTCCAAATGTTCCAAATGTTCCAAATGTTTCACATCCTGATCAT
TCTGTTGCTTTAGATAACAGATTACAGCCCAAGGAAAATAACAAGGTTGAGAATTGTGAT
GCAAAAAGTGAATTAAGGGACAAGGACGATAGATTTGAGAAGAGAGCTGATGATGGTAAG
GACATTAAACATGATGGGGATACTTTACCCGAATATAAGGGAGATGTGAAGGCTGATAAG
GACAGGTTTAGTGGGGTGAGTTGGAAGGATTCTAAAGAAGAAAACACAGGCAAAAGATAT
CTTGATGTCCCTGCTGGGAACGTGGATCCATGGAATGCGTCAAGAACCCATGGTGCTGCT
GAGGTAGGAAAGGAATTCTCAAACGATAACAGGGATTTTGCTCAAGTGCGTGAAGCTATT
GGTGAAAACAAGGTGGATTTGACAGACAAAGATAAAGATAGAAAAAGGAAAGAAGGGAAG
CACCGGGAAGGGGGAGATAGGGATAAAGAAAGAAATGATCGTCGGAATAATTTACAACTA
GGGAATAGCAGTTCTGATAACAAGGAGTTGCTTAAAGAGGAAAGGGAATCTGAGCGGCGG
GAGAAGGAAAGAAGAGATATTTCAAAGGATAAGGAGAGACCAAAGGACTGGGAAAAGGAC
AATGTGAACAGGGAAGTGTGGAATGGAGCGGAGAGAGAGGTTTCACAGAGTGAAAAAAAA
GTGGTTGATGTTCCTGGAAAAACAAATGAGCTGGGAAATTCAACAGTGGAGCTGAAGAAA
CAGAAAGATCATGATAGCTGGAAAAATACTGACAGAGATGGAAGTGAGAGGAGAAAGGAA
AGAGATACTGATTTAGAAGGAGAGAAGCCTGAGAAACCTGGCACGCATCATGATAAAGAA
TCAGAGGGGGAAGCAATGGACACTGAAGGAGGTGGAGAAAGAGAAGCTCTTAATTGTGGA
GTTCAGCAGCGCAAAAGGAGGCCAAGAGGGAGTCCTATGGCCAACCGCGATCCTCCTTTT
AGGTCACACACTCATGAAAATGAAGGATCTCAAGGTAAGCATGATGTATCCACCGTCAAT
TATAGAGTTGGTGAGTGCATGCAAGAACTGATTAAATTGTGGAAGGAATATGAATCATCT
CAAGCTGATAGAGCATCTGAGAGCTCTCCAAGTGGTCCTACTTTAGAAATTAGGATTCCA
GCTGAACACGTATCAGCTACAAATCGCCAGGTGAGAGGTGGCCAGCTATGGGGAACGGAT
ATATACACCAATGACTCAGATCTTGTTGCAGTTCTTATGCACACAGGTTACTGTCGTACT
ACTGCTTCTCCTCTTCTGCCAACCATTAAGGAGTTACACGCTACTATCAGGGTGCTACCT
CCCCAAGATTGCTATATATCAACTCTGAGAAACAATGTGCGTTCACGTGCCTGGGGTGCT
GCAGTTGGCTGCAGCTACTGTATCGAGCGGTGCTCTGTTGTGAAGAAAGGAGGTGGAACC
ATAGATCTTGAACCTTGTCTGACGCACTCCTCAACCTTGGAGCCTACGCTTGCTCCCGTG
ACAGCAGAGCGCACTATGACCACTAGAGCTGCAGCTTCGAATGCACTACGACAACAGAGA
TTTGTACGTGAAGTGACCATTCAGTTCAACTTATGCAATGAGCCTTGGCTCAAATACAGT
ATCAGTGTTGTTGCTGACAAGGGTTTGAAAAAGCCCCTTTTTACATCTTCACGCATGAAA
AAGGGCGAAGTTCTTTATTTGGAAACCCATACTCAAAGGTATGAGCTCTGCTTTAATGGA
GAAAAGATGGTAAAGGCTACGTCTCAGATGCATGAAATGGATGTTGACAAACCTCAAACT
TACAACATACATGTGGCAAACGGAGAAAAATATGGAGCGGATGGTGAAAATATGATGGTA
GATTTGTTTCGATGGTCCCGGTGTAAGAAGGCTTTGCCTCAGAAACTAATGCAATCAGTT
GGAATTCCTTTGCCCCTTGAACACGTTGAGGTTTTGGAGGAGAATGTGGAGTGGGAAGAC
ATTCAATGGTCGCAAACTGGCGTTTGGATTGCTGGAAAAGAATATCCTCTTACTAGAGCA
CATTTTCTTTCCCCAAATTAG

Peptide Sequence

PEP ID

XP_016479825.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107801072 [Nicotiana tabacum]
Sequence

MSTTPNKRPHEDGGNVSGSNRSHSSSPTYYQDDSGRMIKLTSDGKLEFIRSVDVGPDGRM
PKIRRFVSRDSDRRSPELPMYRVSSCPNVPNVPNVSHPDHSVALDNRLQPKENNKVENCD
AKSELRDKDDRFEKRADDGKDIKHDGDTLPEYKGDVKADKDRFSGVSWKDSKEENTGKRY
LDVPAGNVDPWNASRTHGAAEVGKEFSNDNRDFAQVREAIGENKVDLTDKDKDRKRKEGK
HREGGDRDKERNDRRNNLQLGNSSSDNKELLKEERESERREKERRDISKDKERPKDWEKD
NVNREVWNGAEREVSQSEKKVVDVPGKTNELGNSTVELKKQKDHDSWKNTDRDGSERRKE
RDTDLEGEKPEKPGTHHDKESEGEAMDTEGGGEREALNCGVQQRKRRPRGSPMANRDPPF
RSHTHENEGSQGKHDVSTVNYRVGECMQELIKLWKEYESSQADRASESSPSGPTLEIRIP
AEHVSATNRQVRGGQLWGTDIYTNDSDLVAVLMHTGYCRTTASPLLPTIKELHATIRVLP
PQDCYISTLRNNVRSRAWGAAVGCSYCIERCSVVKKGGGTIDLEPCLTHSSTLEPTLAPV
TAERTMTTRAAASNALRQQRFVREVTIQFNLCNEPWLKYSISVVADKGLKKPLFTSSRMK
KGEVLYLETHTQRYELCFNGEKMVKATSQMHEMDVDKPQTYNIHVANGEKYGADGENMMV
DLFRWSRCKKALPQKLMQSVGIPLPLEHVEVLEENVEWEDIQWSQTGVWIAGKEYPLTRA
HFLSPN

Transcript Sequence

Gene sequence data has not been registered.